Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 MME-217ENST00000616757 1315 ntTSL 5 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SLC52A1Q9NWF4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 CDV3P1-201ENST00000471403 739 ntBASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.41■■■□□ 2.46
SLC52A1Q9NWF4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SLC52A1Q9NWF4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
SLC52A1Q9NWF4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SLC52A1Q9NWF4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.46
SLC52A1Q9NWF4 AL589743.5-201ENST00000616611 1050 ntBASIC30.39■■■□□ 2.46
SLC52A1Q9NWF4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC30.39■■■□□ 2.46
SLC52A1Q9NWF4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SLC52A1Q9NWF4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC52A1Q9NWF4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 MCRIP2P1-201ENST00000394346 511 ntBASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 AC245052.3-201ENST00000450182 901 ntBASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SLC52A1Q9NWF4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SLC52A1Q9NWF4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 SAPCD2P1-201ENST00000395413 1184 ntBASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 PNMA6B-201ENST00000538162 1200 ntBASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SLC52A1Q9NWF4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 RPPH1-201ENST00000516869 333 ntBASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC30.34■■■□□ 2.45
SLC52A1Q9NWF4 AC093323.1-202ENST00000635031 2045 ntBASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms