Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RYDENQ9NUL5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RYDENQ9NUL5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RYDENQ9NUL5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 AC010542.4-201ENST00000563151 1910 ntBASIC19.23■□□□□ 0.67
RYDENQ9NUL5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 AC133552.2-202ENST00000575694 574 ntBASIC19.23■□□□□ 0.67
RYDENQ9NUL5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 OR10C1-204ENST00000622521 1039 ntBASIC19.23■□□□□ 0.67
RYDENQ9NUL5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 AC061975.6-201ENST00000579045 1553 ntBASIC19.23■□□□□ 0.67
RYDENQ9NUL5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.23■□□□□ 0.67
RYDENQ9NUL5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 AL512625.2-201ENST00000417533 625 ntBASIC19.22■□□□□ 0.67
RYDENQ9NUL5 CDV3P1-201ENST00000471403 739 ntBASIC19.22■□□□□ 0.67
RYDENQ9NUL5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 AC244015.2-201ENST00000616358 1861 ntBASIC19.22■□□□□ 0.67
RYDENQ9NUL5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RYDENQ9NUL5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 AC090192.1-201ENST00000517740 490 ntBASIC19.21■□□□□ 0.67
RYDENQ9NUL5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 ADAM3B-201ENST00000569937 840 ntBASIC19.21■□□□□ 0.67
RYDENQ9NUL5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 FAM21FP-204ENST00000608637 956 ntBASIC19.21■□□□□ 0.67
RYDENQ9NUL5 AC100791.3-201ENST00000617619 330 ntBASIC19.21■□□□□ 0.67
RYDENQ9NUL5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RYDENQ9NUL5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 CNN2P6-201ENST00000439038 900 ntBASIC19.2■□□□□ 0.66
RYDENQ9NUL5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 AC069236.1-201ENST00000604339 616 ntBASIC19.2■□□□□ 0.66
RYDENQ9NUL5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RYDENQ9NUL5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RYDENQ9NUL5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms