Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CCM2LQ9NUG4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 AC097381.1-201ENST00000429019 1296 ntBASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCM2LQ9NUG4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 AL162430.1-201ENST00000480705 870 ntBASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.93■□□□□ 0.78
CCM2LQ9NUG4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 RNF165-205ENST00000588679 2904 ntBASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 AC087623.3-201ENST00000607047 1098 ntBASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2LQ9NUG4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 AC073314.1-201ENST00000568729 2216 ntBASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 MIR939-201ENST00000401314 82 ntBASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2LQ9NUG4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2LQ9NUG4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCM2LQ9NUG4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms