Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 AP005212.1-201ENST00000581547 1997 ntBASIC19.02■□□□□ 0.64
HMG20AQ9NP66 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HMG20AQ9NP66 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.63
HMG20AQ9NP66 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HMG20AQ9NP66 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.02■□□□□ 0.63
HMG20AQ9NP66 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMG20AQ9NP66 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20AQ9NP66 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19■□□□□ 0.63
HMG20AQ9NP66 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19■□□□□ 0.63
HMG20AQ9NP66 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19■□□□□ 0.63
HMG20AQ9NP66 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 LINC01960-201ENST00000563759 1884 ntBASIC19■□□□□ 0.63
HMG20AQ9NP66 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19■□□□□ 0.63
HMG20AQ9NP66 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMG20AQ9NP66 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HMG20AQ9NP66 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19■□□□□ 0.63
HMG20AQ9NP66 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20AQ9NP66 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMG20AQ9NP66 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 MIR6722-201ENST00000617286 78 ntBASIC18.99■□□□□ 0.63
HMG20AQ9NP66 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20AQ9NP66 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HMG20AQ9NP66 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20AQ9NP66 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms