Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.1■■□□□ 1.13
ATXN3LQ9H3M9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
ATXN3LQ9H3M9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATXN3LQ9H3M9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.1■■□□□ 1.13
ATXN3LQ9H3M9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 AC007322.4-201ENST00000509611 723 ntBASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 KRT18P6-201ENST00000555540 1265 ntBASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.09■■□□□ 1.13
ATXN3LQ9H3M9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 AC133041.1-202ENST00000642053 222 ntBASIC22.08■■□□□ 1.13
ATXN3LQ9H3M9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ATXN3LQ9H3M9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
ATXN3LQ9H3M9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 AC069152.1-201ENST00000438030 544 ntBASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 AC008694.1-202ENST00000636953 945 ntBASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.07■■□□□ 1.12
ATXN3LQ9H3M9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 AC242852.2-201ENST00000615738 1807 ntBASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 AC092053.2-201ENST00000640557 1818 ntBASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 AC003102.1-202ENST00000563394 1796 ntBASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.06■■□□□ 1.12
ATXN3LQ9H3M9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 MKRN4P-201ENST00000444706 1521 ntBASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 KRT16P2-201ENST00000414673 1423 ntBASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATXN3LQ9H3M9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 ECEL1P1-201ENST00000373592 1742 ntBASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms