Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 IKBKGP1-201ENST00000612193 1073 ntBASIC19.46■□□□□ 0.71
UBQLN3Q9H347 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN3Q9H347 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 KRT87P-202ENST00000534226 1464 ntBASIC19.45■□□□□ 0.7
UBQLN3Q9H347 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN3Q9H347 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 AC026471.6-201ENST00000622954 1905 ntBASIC19.44■□□□□ 0.7
UBQLN3Q9H347 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 AP006587.3-201ENST00000525742 1516 ntBASIC19.44■□□□□ 0.7
UBQLN3Q9H347 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
UBQLN3Q9H347 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN3Q9H347 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.43■□□□□ 0.7
UBQLN3Q9H347 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN3Q9H347 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
UBQLN3Q9H347 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBQLN3Q9H347 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN3Q9H347 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.43■□□□□ 0.7
UBQLN3Q9H347 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN3Q9H347 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 KRT19P1-201ENST00000405746 1186 ntBASIC19.41■□□□□ 0.7
UBQLN3Q9H347 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 AL137784.2-201ENST00000607332 1000 ntBASIC19.41■□□□□ 0.7
UBQLN3Q9H347 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 FEM1AP4-201ENST00000443167 1987 ntBASIC19.41■□□□□ 0.7
UBQLN3Q9H347 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN3Q9H347 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 AC006015.1-201ENST00000429970 570 ntBASIC19.4■□□□□ 0.7
UBQLN3Q9H347 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN3Q9H347 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms