Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
SCAPERQ9BY12 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.98■■■□□ 2.71
SCAPERQ9BY12 AC137767.1-201ENST00000602918 1920 ntBASIC31.98■■■□□ 2.71
SCAPERQ9BY12 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC31.98■■■□□ 2.71
SCAPERQ9BY12 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SCAPERQ9BY12 SLC29A4P2-201ENST00000504749 1089 ntBASIC31.98■■■□□ 2.71
SCAPERQ9BY12 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC31.98■■■□□ 2.71
SCAPERQ9BY12 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.98■■■□□ 2.71
SCAPERQ9BY12 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
SCAPERQ9BY12 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 MDFI-202ENST00000373050 809 ntTSL 2 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 KRT17P3-201ENST00000420566 1262 ntBASIC31.97■■■□□ 2.71
SCAPERQ9BY12 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 REXO1L12P-201ENST00000622156 912 ntBASIC31.97■■■□□ 2.71
SCAPERQ9BY12 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SCAPERQ9BY12 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SCAPERQ9BY12 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SCAPERQ9BY12 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC31.96■■■□□ 2.71
SCAPERQ9BY12 LINC01023-201ENST00000606054 436 ntBASIC31.96■■■□□ 2.71
SCAPERQ9BY12 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SCAPERQ9BY12 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SCAPERQ9BY12 AC092368.3-202ENST00000574180 1591 ntBASIC31.96■■■□□ 2.71
SCAPERQ9BY12 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
SCAPERQ9BY12 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SCAPERQ9BY12 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SCAPERQ9BY12 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.95■■■□□ 2.7
SCAPERQ9BY12 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.95■■■□□ 2.7
SCAPERQ9BY12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
SCAPERQ9BY12 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC31.93■■■□□ 2.7
SCAPERQ9BY12 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 SOX15-203ENST00000570788 1093 ntBASIC31.92■■■□□ 2.7
SCAPERQ9BY12 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 AL589743.5-201ENST00000616611 1050 ntBASIC31.92■■■□□ 2.7
SCAPERQ9BY12 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 KLF2-202ENST00000592003 564 ntTSL 3 BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SCAPERQ9BY12 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.91■■■□□ 2.7
SCAPERQ9BY12 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.91■■■□□ 2.7
SCAPERQ9BY12 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SCAPERQ9BY12 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
SCAPERQ9BY12 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SCAPERQ9BY12 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SCAPERQ9BY12 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SCAPERQ9BY12 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
SCAPERQ9BY12 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.9■■■□□ 2.7
SCAPERQ9BY12 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.9■■■□□ 2.7
SCAPERQ9BY12 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC31.9■■■□□ 2.7
SCAPERQ9BY12 BX088651.1-201ENST00000540551 451 ntBASIC31.9■■■□□ 2.7
SCAPERQ9BY12 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SCAPERQ9BY12 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SCAPERQ9BY12 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.89■■■□□ 2.7
SCAPERQ9BY12 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SCAPERQ9BY12 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SCAPERQ9BY12 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
SCAPERQ9BY12 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC31.88■■■□□ 2.69
SCAPERQ9BY12 MCRIP2P1-201ENST00000394346 511 ntBASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms