Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 AC133637.1-201ENST00000624115 1537 ntBASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA4Q9BXL8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 GUSBP5-201ENST00000418136 578 ntBASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDCA4Q9BXL8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA4Q9BXL8 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.83■□□□□ 0.61
CDCA4Q9BXL8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA4Q9BXL8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA4Q9BXL8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA4Q9BXL8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA4Q9BXL8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDCA4Q9BXL8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.83■□□□□ 0.6
CDCA4Q9BXL8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 AL162377.1-201ENST00000618844 1793 ntBASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDCA4Q9BXL8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 AC239859.2-201ENST00000444165 318 ntBASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.81■□□□□ 0.6
CDCA4Q9BXL8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms