Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAF4Q9BUZ4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 AC004911.1-201ENST00000416316 871 ntBASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAF4Q9BUZ4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 AL353803.4-201ENST00000565882 1934 ntBASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAF4Q9BUZ4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 TPRG1LP1-201ENST00000598702 760 ntBASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 AC087239.1-201ENST00000622671 572 ntBASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF4Q9BUZ4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF4Q9BUZ4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 AC010141.3-201ENST00000456659 717 ntBASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF4Q9BUZ4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms