Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRDL1Q9BU40 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRDL1Q9BU40 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRDL1Q9BU40 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRDL1Q9BU40 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 EDA-201ENST00000338901 1233 ntBASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 AP001330.3-201ENST00000520123 633 ntBASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 IGHV3-19-201ENST00000521488 291 ntBASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 AP004607.7-201ENST00000527152 1677 ntBASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRDL1Q9BU40 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 AC027682.1-201ENST00000562846 899 ntBASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 AL355001.2-201ENST00000620617 1191 ntBASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRDL1Q9BU40 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 AF213884.3-201ENST00000563833 479 ntBASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 AC244015.2-201ENST00000616358 1861 ntBASIC16.59■□□□□ 0.25
CHRDL1Q9BU40 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRDL1Q9BU40 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms