Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS1Q99742 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
NPAS1Q99742 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS1Q99742 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS1Q99742 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS1Q99742 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPAS1Q99742 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS1Q99742 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.15■□□□□ 0.66
NPAS1Q99742 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.15■□□□□ 0.66
NPAS1Q99742 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.15■□□□□ 0.66
NPAS1Q99742 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 AC007375.3-201ENST00000600936 2314 ntBASIC19.15■□□□□ 0.66
NPAS1Q99742 AC244015.2-201ENST00000616358 1861 ntBASIC19.15■□□□□ 0.66
NPAS1Q99742 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.15■□□□□ 0.66
NPAS1Q99742 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPAS1Q99742 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.15■□□□□ 0.66
NPAS1Q99742 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPAS1Q99742 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NPAS1Q99742 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS1Q99742 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS1Q99742 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.14■□□□□ 0.65
NPAS1Q99742 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.14■□□□□ 0.65
NPAS1Q99742 AC104564.3-201ENST00000582367 638 ntBASIC19.14■□□□□ 0.65
NPAS1Q99742 AC053503.5-201ENST00000601508 636 ntBASIC19.14■□□□□ 0.65
NPAS1Q99742 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS1Q99742 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NPAS1Q99742 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NPAS1Q99742 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.14■□□□□ 0.65
NPAS1Q99742 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NPAS1Q99742 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPAS1Q99742 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NPAS1Q99742 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.13■□□□□ 0.65
NPAS1Q99742 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS1Q99742 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS1Q99742 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS1Q99742 Z98882.1-201ENST00000622160 2253 ntBASIC19.13■□□□□ 0.65
NPAS1Q99742 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS1Q99742 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS1Q99742 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NPAS1Q99742 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS1Q99742 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS1Q99742 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NPAS1Q99742 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS1Q99742 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS1Q99742 AC061975.6-201ENST00000579045 1553 ntBASIC19.12■□□□□ 0.65
NPAS1Q99742 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NPAS1Q99742 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS1Q99742 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
NPAS1Q99742 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS1Q99742 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.12■□□□□ 0.65
NPAS1Q99742 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NPAS1Q99742 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS1Q99742 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.11■□□□□ 0.65
NPAS1Q99742 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NPAS1Q99742 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.11■□□□□ 0.65
NPAS1Q99742 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.11■□□□□ 0.65
NPAS1Q99742 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.11■□□□□ 0.65
NPAS1Q99742 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.11■□□□□ 0.65
NPAS1Q99742 AC138907.5-202ENST00000569484 235 ntBASIC19.11■□□□□ 0.65
NPAS1Q99742 IKBKGP1-201ENST00000612193 1073 ntBASIC19.11■□□□□ 0.65
NPAS1Q99742 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPAS1Q99742 AC026310.3-201ENST00000625186 2373 ntBASIC19.11■□□□□ 0.65
NPAS1Q99742 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS1Q99742 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS1Q99742 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS1Q99742 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS1Q99742 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms