Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIR6089-201ENST00000616698 64 ntBASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 AC113410.3-201ENST00000623366 203 ntBASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 LINC00543-201ENST00000567234 1845 ntBASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3BQ96NU0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 AC144652.1-201ENST00000609974 1624 ntBASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 PNMA6B-201ENST00000538162 1200 ntBASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP3BQ96NU0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 AC142381.3-201ENST00000568208 1670 ntBASIC20.12■□□□□ 0.81
CNTNAP3BQ96NU0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 AC006557.6-201ENST00000623071 864 ntBASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3BQ96NU0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 MMP23A-201ENST00000234610 1017 ntBASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 KRT18P57-201ENST00000443599 1254 ntBASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3BQ96NU0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 UPK3BP1-201ENST00000428678 509 ntBASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3BQ96NU0 MIR6786-201ENST00000616843 113 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms