Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 AC073314.1-201ENST00000568729 2216 ntBASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NSMCE2Q96MF7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 AP004607.7-201ENST00000527152 1677 ntBASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 MIR6724-1-201ENST00000616420 92 ntBASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 MIR6724-2-201ENST00000616483 92 ntBASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 MIR6724-4-201ENST00000617390 92 ntBASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 MIR6724-3-201ENST00000622482 92 ntBASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.79■□□□□ 0.76
NSMCE2Q96MF7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 AC239859.2-201ENST00000444165 318 ntBASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
NSMCE2Q96MF7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 AC099791.2-201ENST00000605725 427 ntBASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NSMCE2Q96MF7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NSMCE2Q96MF7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NSMCE2Q96MF7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NSMCE2Q96MF7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
NSMCE2Q96MF7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
NSMCE2Q96MF7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.77■□□□□ 0.75
NSMCE2Q96MF7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 PLK5-205ENST00000642079 1969 ntBASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NSMCE2Q96MF7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NSMCE2Q96MF7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NSMCE2Q96MF7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NSMCE2Q96MF7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
NSMCE2Q96MF7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
NSMCE2Q96MF7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms