Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COX4I2Q96KJ9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COX4I2Q96KJ9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COX4I2Q96KJ9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 AL161729.1-201ENST00000604104 1402 ntBASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COX4I2Q96KJ9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COX4I2Q96KJ9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
COX4I2Q96KJ9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 AC005703.6-201ENST00000623265 1329 ntBASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 SERBP1P1-201ENST00000396021 1160 ntBASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.29■□□□□ 0.68
COX4I2Q96KJ9 FEM1AP1-201ENST00000431297 1995 ntBASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 AC011298.3-201ENST00000615796 283 ntBASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.28■□□□□ 0.68
COX4I2Q96KJ9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms