Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 AC010980.2-201ENST00000587099 1412 ntBASIC21.11■□□□□ 0.97
SIPA1Q96FS4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SIPA1Q96FS4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 AC080038.3-201ENST00000623346 1952 ntBASIC21.1■□□□□ 0.97
SIPA1Q96FS4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 C1orf229-201ENST00000623686 2258 ntBASIC21.1■□□□□ 0.97
SIPA1Q96FS4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.1■□□□□ 0.97
SIPA1Q96FS4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 POU5F1P3-201ENST00000428824 1078 ntBASIC21.09■□□□□ 0.97
SIPA1Q96FS4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 AC097658.1-201ENST00000475555 843 ntBASIC21.09■□□□□ 0.97
SIPA1Q96FS4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 AC127496.7-201ENST00000625110 1798 ntBASIC21.09■□□□□ 0.97
SIPA1Q96FS4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SIPA1Q96FS4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.08■□□□□ 0.97
SIPA1Q96FS4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIPA1Q96FS4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIPA1Q96FS4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SIPA1Q96FS4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.08■□□□□ 0.97
SIPA1Q96FS4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SIPA1Q96FS4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 AC066615.1-201ENST00000640911 628 ntBASIC21.07■□□□□ 0.96
SIPA1Q96FS4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SIPA1Q96FS4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.06■□□□□ 0.96
SIPA1Q96FS4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 AC091874.3-201ENST00000512672 1195 ntBASIC21.05■□□□□ 0.96
SIPA1Q96FS4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 AC083880.1-201ENST00000608266 535 ntBASIC21.05■□□□□ 0.96
SIPA1Q96FS4 MYC-209ENST00000641252 345 ntBASIC21.05■□□□□ 0.96
SIPA1Q96FS4 AC026471.6-201ENST00000622954 1905 ntBASIC21.05■□□□□ 0.96
SIPA1Q96FS4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SIPA1Q96FS4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms