Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UBE2E3Q969T4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2E3Q969T4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 AC008175.2-201ENST00000612840 297 ntBASIC20.18■□□□□ 0.82
UBE2E3Q969T4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2E3Q969T4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.17■□□□□ 0.82
UBE2E3Q969T4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 TERF1P2-201ENST00000583350 1212 ntBASIC20.17■□□□□ 0.82
UBE2E3Q969T4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 AL024507.2-201ENST00000606070 2574 ntBASIC20.17■□□□□ 0.82
UBE2E3Q969T4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.17■□□□□ 0.82
UBE2E3Q969T4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
UBE2E3Q969T4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms