Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NPIPB3Q92617 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPB3Q92617 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPB3Q92617 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPB3Q92617 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 SMUG1P1-201ENST00000590640 811 ntBASIC16.52■□□□□ 0.24
NPIPB3Q92617 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.52■□□□□ 0.24
NPIPB3Q92617 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPB3Q92617 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
NPIPB3Q92617 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.52■□□□□ 0.23
NPIPB3Q92617 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPIPB3Q92617 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NPIPB3Q92617 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPB3Q92617 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPB3Q92617 LINC01006-201ENST00000333319 2292 ntBASIC16.5■□□□□ 0.23
NPIPB3Q92617 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPB3Q92617 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPIPB3Q92617 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms