Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC128676.1-201ENST00000454392 318 ntBASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 AC091799.1-201ENST00000422823 811 ntBASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 UNC93B5-201ENST00000530315 699 ntBASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 AP006294.2-201ENST00000641667 209 ntBASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC27.73■■■□□ 2.03
RAPGEF4Q8WZA2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 FAM21FP-204ENST00000608637 956 ntBASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 KRT17P1-201ENST00000399211 1546 ntBASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF4Q8WZA2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 AL355472.2-201ENST00000422958 438 ntBASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 AL158047.1-201ENST00000445918 881 ntBASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 AC026366.1-201ENST00000488803 879 ntBASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF4Q8WZA2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
RAPGEF4Q8WZA2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 AC245052.3-201ENST00000450182 901 ntBASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF4Q8WZA2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF4Q8WZA2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.69■■■□□ 2.02
RAPGEF4Q8WZA2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.69■■■□□ 2.02
RAPGEF4Q8WZA2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF4Q8WZA2 AC142381.4-202ENST00000563973 229 ntBASIC27.69■■■□□ 2.02
RAPGEF4Q8WZA2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.69■■■□□ 2.02
RAPGEF4Q8WZA2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF4Q8WZA2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 CDV3P1-201ENST00000471403 739 ntBASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 AP003097.1-201ENST00000530657 1135 ntBASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF4Q8WZA2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 AC100791.3-201ENST00000617619 330 ntBASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.67■■■□□ 2.02
RAPGEF4Q8WZA2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF4Q8WZA2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC27.66■■■□□ 2.02
RAPGEF4Q8WZA2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.66■■■□□ 2.02
RAPGEF4Q8WZA2 CYP2T3P-201ENST00000601990 817 ntBASIC27.66■■■□□ 2.02
RAPGEF4Q8WZA2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.66■■■□□ 2.02
RAPGEF4Q8WZA2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF4Q8WZA2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 AC073648.6-201ENST00000641589 218 ntBASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.65■■■□□ 2.02
RAPGEF4Q8WZA2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms