Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCFD1Q8WVM8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4L2-201ENST00000561772 1275 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 KRT18P61-201ENST00000585825 1298 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4L6-201ENST00000626483 1275 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4L1-201ENST00000627662 1275 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4L8-201ENST00000629013 1275 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4L3-201ENST00000630187 1275 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4L7-201ENST00000630678 1275 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DUX4L5-201ENST00000630834 1275 ntBASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCFD1Q8WVM8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.12■■□□□ 1.29
SCFD1Q8WVM8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 AC004854.2-201ENST00000608450 1441 ntBASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 AC097381.1-201ENST00000429019 1296 ntBASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 AC138907.5-202ENST00000569484 235 ntBASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 AP004607.4-201ENST00000530158 1459 ntBASIC23.11■■□□□ 1.29
SCFD1Q8WVM8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 AC104187.1-201ENST00000607510 612 ntBASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCFD1Q8WVM8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 RARRES2P6-201ENST00000567333 442 ntBASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 MIR6821-201ENST00000617625 74 ntBASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SCFD1Q8WVM8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.29
SCFD1Q8WVM8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCFD1Q8WVM8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCFD1Q8WVM8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCFD1Q8WVM8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCFD1Q8WVM8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.08■■□□□ 1.29
SCFD1Q8WVM8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms