Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
SNED1Q8TER0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.82■■□□□ 1.72
SNED1Q8TER0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.82■■□□□ 1.72
SNED1Q8TER0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNED1Q8TER0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.82■■□□□ 1.72
SNED1Q8TER0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.81■■□□□ 1.72
SNED1Q8TER0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
SNED1Q8TER0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.81■■□□□ 1.72
SNED1Q8TER0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNED1Q8TER0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNED1Q8TER0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SNED1Q8TER0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.81■■□□□ 1.72
SNED1Q8TER0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
SNED1Q8TER0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 AC100791.3-201ENST00000617619 330 ntBASIC25.8■■□□□ 1.72
SNED1Q8TER0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 LSM12P1-201ENST00000411836 588 ntBASIC25.8■■□□□ 1.72
SNED1Q8TER0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNED1Q8TER0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.8■■□□□ 1.72
SNED1Q8TER0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
SNED1Q8TER0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNED1Q8TER0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.79■■□□□ 1.72
SNED1Q8TER0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNED1Q8TER0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNED1Q8TER0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNED1Q8TER0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNED1Q8TER0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SNED1Q8TER0 AC233263.1-201ENST00000578059 224 ntBASIC25.79■■□□□ 1.72
SNED1Q8TER0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.79■■□□□ 1.72
SNED1Q8TER0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNED1Q8TER0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNED1Q8TER0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNED1Q8TER0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNED1Q8TER0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNED1Q8TER0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNED1Q8TER0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNED1Q8TER0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNED1Q8TER0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNED1Q8TER0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.78■■□□□ 1.72
SNED1Q8TER0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNED1Q8TER0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNED1Q8TER0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNED1Q8TER0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SNED1Q8TER0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNED1Q8TER0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.77■■□□□ 1.72
SNED1Q8TER0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.77■■□□□ 1.72
SNED1Q8TER0 MIR4497-201ENST00000583208 89 ntBASIC25.77■■□□□ 1.72
SNED1Q8TER0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.77■■□□□ 1.72
SNED1Q8TER0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
SNED1Q8TER0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNED1Q8TER0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNED1Q8TER0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNED1Q8TER0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNED1Q8TER0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNED1Q8TER0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNED1Q8TER0 RPPH1-201ENST00000516869 333 ntBASIC25.76■■□□□ 1.71
SNED1Q8TER0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.76■■□□□ 1.71
SNED1Q8TER0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNED1Q8TER0 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.76■■□□□ 1.71
SNED1Q8TER0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.75■■□□□ 1.71
SNED1Q8TER0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SNED1Q8TER0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.75■■□□□ 1.71
SNED1Q8TER0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNED1Q8TER0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.75■■□□□ 1.71
SNED1Q8TER0 SLC29A4P2-201ENST00000504749 1089 ntBASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms