Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01560Q8TB33 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 LSM12P1-201ENST00000411836 588 ntBASIC18.23■□□□□ 0.51
LINC01560Q8TB33 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.23■□□□□ 0.51
LINC01560Q8TB33 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC01560Q8TB33 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 AC026471.6-201ENST00000622954 1905 ntBASIC18.22■□□□□ 0.51
LINC01560Q8TB33 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC01560Q8TB33 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 AC080038.3-201ENST00000623346 1952 ntBASIC18.21■□□□□ 0.51
LINC01560Q8TB33 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 AL355472.2-201ENST00000422958 438 ntBASIC18.21■□□□□ 0.51
LINC01560Q8TB33 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 RPS2P52-201ENST00000469610 820 ntBASIC18.21■□□□□ 0.51
LINC01560Q8TB33 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01560Q8TB33 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LINC01560Q8TB33 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01560Q8TB33 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms