Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 AC123595.1-201ENST00000440769 1046 ntBASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SIMC1Q8NDZ2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.77■□□□□ 0.75
SIMC1Q8NDZ2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 PKD1P6-201ENST00000343738 4769 ntBASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 AC026271.2-201ENST00000428091 497 ntBASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIMC1Q8NDZ2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 KRT18P61-201ENST00000585825 1298 ntBASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 AC087623.3-201ENST00000607047 1098 ntBASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 AC005229.4-201ENST00000610085 2198 ntBASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.75■□□□□ 0.75
SIMC1Q8NDZ2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 KRT18P14-201ENST00000534205 1250 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4L2-201ENST00000561772 1275 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4L6-201ENST00000626483 1275 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4L1-201ENST00000627662 1275 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4L8-201ENST00000629013 1275 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4L3-201ENST00000630187 1275 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4L7-201ENST00000630678 1275 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUX4L5-201ENST00000630834 1275 ntBASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIMC1Q8NDZ2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 AC079140.4-201ENST00000507448 529 ntBASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.73■□□□□ 0.75
SIMC1Q8NDZ2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms