Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 AL137060.1-201ENST00000618151 2648 ntBASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ZNF439Q8NDP4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 MIR638-201ENST00000385237 100 ntBASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF439Q8NDP4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 FEM1AP4-201ENST00000443167 1987 ntBASIC17.34■□□□□ 0.37
ZNF439Q8NDP4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF439Q8NDP4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 AL354811.1-201ENST00000610286 706 ntBASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF439Q8NDP4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms