Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RETREG2Q8NC44 AC055733.4-201ENST00000638462 1354 ntBASIC23.8■■□□□ 1.4
RETREG2Q8NC44 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.8■■□□□ 1.4
RETREG2Q8NC44 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.79■■□□□ 1.4
RETREG2Q8NC44 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 GUSBP6-202ENST00000438529 1198 ntBASIC23.78■■□□□ 1.4
RETREG2Q8NC44 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 AL138781.1-201ENST00000566567 1274 ntBASIC23.78■■□□□ 1.4
RETREG2Q8NC44 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.78■■□□□ 1.4
RETREG2Q8NC44 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 AC066615.1-201ENST00000640911 628 ntBASIC23.77■■□□□ 1.4
RETREG2Q8NC44 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RETREG2Q8NC44 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 AF201337.1-201ENST00000520239 748 ntBASIC23.76■■□□□ 1.39
RETREG2Q8NC44 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RETREG2Q8NC44 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.75■■□□□ 1.39
RETREG2Q8NC44 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms