Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC71LQ8N9Z2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC71LQ8N9Z2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC71LQ8N9Z2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71LQ8N9Z2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 TSPY9P-201ENST00000440215 945 ntBASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 TSPY11P-201ENST00000442607 1045 ntBASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 OR2I1P-207ENST00000453522 948 ntBASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 AC006128.1-201ENST00000624704 1661 ntBASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71LQ8N9Z2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC71LQ8N9Z2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 AC003102.1-202ENST00000563394 1796 ntBASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC71LQ8N9Z2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC71LQ8N9Z2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms