Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 SLC7A5P2-201ENST00000553010 536 ntBASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 AC008175.2-201ENST00000612840 297 ntBASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZIC4Q8N9L1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
ZIC4Q8N9L1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZIC4Q8N9L1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ZIC4Q8N9L1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 KRT18P20-201ENST00000548986 1279 ntBASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 AC022517.1-201ENST00000592429 346 ntBASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZIC4Q8N9L1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 AC007375.3-201ENST00000600936 2314 ntBASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZIC4Q8N9L1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC4Q8N9L1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 FEM1AP4-201ENST00000443167 1987 ntBASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 KRT16P2-201ENST00000414673 1423 ntBASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 AC137761.2-201ENST00000561729 223 ntBASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 AC145350.3-201ENST00000569033 163 ntBASIC18.61■□□□□ 0.57
ZIC4Q8N9L1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms