Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 AC060766.5-201ENST00000590539 871 ntBASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A3Q8N4M1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 HLA-B-256ENST00000639848 1089 ntBASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A3Q8N4M1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.64■■□□□ 1.06
SLC44A3Q8N4M1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 MIR718-201ENST00000390190 70 ntBASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 RPPH1-201ENST00000516869 333 ntBASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SLC44A3Q8N4M1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A3Q8N4M1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 MIR4497-201ENST00000583208 89 ntBASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 CYP2T3P-201ENST00000601990 817 ntBASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 FAM21FP-204ENST00000608637 956 ntBASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 AC100791.3-201ENST00000617619 330 ntBASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 FAM197Y4-202ENST00000622692 608 ntBASIC21.62■■□□□ 1.05
SLC44A3Q8N4M1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 C1QBPP2-201ENST00000528754 825 ntBASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC44A3Q8N4M1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 AC091799.1-201ENST00000422823 811 ntBASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A3Q8N4M1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.59■■□□□ 1.05
SLC44A3Q8N4M1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms