Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01561Q8N1V8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LINC01561Q8N1V8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
LINC01561Q8N1V8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
LINC01561Q8N1V8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LINC01561Q8N1V8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 AP005212.1-201ENST00000581547 1997 ntBASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC01561Q8N1V8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 LINC01006-201ENST00000333319 2292 ntBASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 SERBP1P1-201ENST00000396021 1160 ntBASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 AL512631.2-201ENST00000604634 923 ntBASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 AC009237.3-201ENST00000393279 1427 ntBASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC01561Q8N1V8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 AL157384.1-201ENST00000445995 2473 ntBASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 AC121338.2-201ENST00000622535 1744 ntBASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC01561Q8N1V8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC01561Q8N1V8 SLC47A1P1-202ENST00000449666 945 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms