Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 AC092368.3-202ENST00000574180 1591 ntBASIC31.57■■■□□ 2.64
ABCA6Q8N139 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.57■■■□□ 2.64
ABCA6Q8N139 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ABCA6Q8N139 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ABCA6Q8N139 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
ABCA6Q8N139 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
ABCA6Q8N139 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ABCA6Q8N139 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ABCA6Q8N139 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
ABCA6Q8N139 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ABCA6Q8N139 AC100791.3-201ENST00000617619 330 ntBASIC31.56■■■□□ 2.64
ABCA6Q8N139 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ABCA6Q8N139 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC31.55■■■□□ 2.64
ABCA6Q8N139 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
ABCA6Q8N139 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC31.55■■■□□ 2.64
ABCA6Q8N139 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC31.55■■■□□ 2.64
ABCA6Q8N139 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.55■■■□□ 2.64
ABCA6Q8N139 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ABCA6Q8N139 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA6Q8N139 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA6Q8N139 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA6Q8N139 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA6Q8N139 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA6Q8N139 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
ABCA6Q8N139 BX088651.1-201ENST00000540551 451 ntBASIC31.53■■■□□ 2.64
ABCA6Q8N139 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC31.53■■■□□ 2.64
ABCA6Q8N139 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC31.53■■■□□ 2.64
ABCA6Q8N139 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.53■■■□□ 2.64
ABCA6Q8N139 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ABCA6Q8N139 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
ABCA6Q8N139 AC137767.1-201ENST00000602918 1920 ntBASIC31.52■■■□□ 2.64
ABCA6Q8N139 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
ABCA6Q8N139 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
ABCA6Q8N139 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
ABCA6Q8N139 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ABCA6Q8N139 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC31.52■■■□□ 2.64
ABCA6Q8N139 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ABCA6Q8N139 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
ABCA6Q8N139 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.52■■■□□ 2.64
ABCA6Q8N139 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
ABCA6Q8N139 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
ABCA6Q8N139 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
ABCA6Q8N139 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.51■■■□□ 2.63
ABCA6Q8N139 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ABCA6Q8N139 AC211429.1-201ENST00000415277 523 ntBASIC31.51■■■□□ 2.63
ABCA6Q8N139 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
ABCA6Q8N139 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
ABCA6Q8N139 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.51■■■□□ 2.63
ABCA6Q8N139 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.51■■■□□ 2.63
ABCA6Q8N139 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
ABCA6Q8N139 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ABCA6Q8N139 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.5■■■□□ 2.63
ABCA6Q8N139 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.5■■■□□ 2.63
ABCA6Q8N139 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.5■■■□□ 2.63
ABCA6Q8N139 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ABCA6Q8N139 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.5■■■□□ 2.63
ABCA6Q8N139 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ABCA6Q8N139 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ABCA6Q8N139 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
ABCA6Q8N139 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA6Q8N139 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
ABCA6Q8N139 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
ABCA6Q8N139 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.49■■■□□ 2.63
ABCA6Q8N139 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
ABCA6Q8N139 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA6Q8N139 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC31.49■■■□□ 2.63
ABCA6Q8N139 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA6Q8N139 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA6Q8N139 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA6Q8N139 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC31.49■■■□□ 2.63
ABCA6Q8N139 KRT17P3-201ENST00000420566 1262 ntBASIC31.49■■■□□ 2.63
ABCA6Q8N139 RN7SL471P-201ENST00000580476 299 ntBASIC31.49■■■□□ 2.63
ABCA6Q8N139 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC31.49■■■□□ 2.63
ABCA6Q8N139 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.48■■■□□ 2.63
ABCA6Q8N139 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC31.48■■■□□ 2.63
ABCA6Q8N139 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ABCA6Q8N139 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ABCA6Q8N139 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ABCA6Q8N139 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.48■■■□□ 2.63
ABCA6Q8N139 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC31.48■■■□□ 2.63
ABCA6Q8N139 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC31.48■■■□□ 2.63
ABCA6Q8N139 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.48■■■□□ 2.63
ABCA6Q8N139 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ABCA6Q8N139 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC31.48■■■□□ 2.63
ABCA6Q8N139 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.47■■■□□ 2.63
ABCA6Q8N139 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC31.47■■■□□ 2.63
ABCA6Q8N139 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.47■■■□□ 2.63
ABCA6Q8N139 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ABCA6Q8N139 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ABCA6Q8N139 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms