Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD3Q8IVD9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD3Q8IVD9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUDCD3Q8IVD9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.83■□□□□ 0.92
NUDCD3Q8IVD9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.83■□□□□ 0.92
NUDCD3Q8IVD9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 AP005212.1-201ENST00000581547 1997 ntBASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD3Q8IVD9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 RARRES2P1-201ENST00000474487 481 ntBASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 PLK5-205ENST00000642079 1969 ntBASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD3Q8IVD9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 AC073314.1-201ENST00000568729 2216 ntBASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD3Q8IVD9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 AL356740.2-201ENST00000601559 647 ntBASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD3Q8IVD9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 KRT16P3-201ENST00000439127 1283 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms