Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20■□□□□ 0.79
RAB43Q86YS6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20■□□□□ 0.79
RAB43Q86YS6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 AC010141.2-201ENST00000452426 721 ntBASIC19.99■□□□□ 0.79
RAB43Q86YS6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 KRT18P20-201ENST00000548986 1279 ntBASIC19.99■□□□□ 0.79
RAB43Q86YS6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 AC138907.5-202ENST00000569484 235 ntBASIC19.99■□□□□ 0.79
RAB43Q86YS6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB43Q86YS6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RAB43Q86YS6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB43Q86YS6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB43Q86YS6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB43Q86YS6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB43Q86YS6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB43Q86YS6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.98■□□□□ 0.79
RAB43Q86YS6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB43Q86YS6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB43Q86YS6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.98■□□□□ 0.79
RAB43Q86YS6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB43Q86YS6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB43Q86YS6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB43Q86YS6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB43Q86YS6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 DUX4L16-201ENST00000555130 1264 ntBASIC19.97■□□□□ 0.79
RAB43Q86YS6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB43Q86YS6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB43Q86YS6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 AL121832.2-201ENST00000610979 668 ntBASIC19.96■□□□□ 0.79
RAB43Q86YS6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB43Q86YS6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB43Q86YS6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 AC005181.1-201ENST00000604782 1256 ntBASIC19.95■□□□□ 0.78
RAB43Q86YS6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB43Q86YS6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB43Q86YS6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RAB43Q86YS6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB43Q86YS6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB43Q86YS6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB43Q86YS6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB43Q86YS6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RAB43Q86YS6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB43Q86YS6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAB43Q86YS6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB43Q86YS6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB43Q86YS6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms