Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 AC091799.1-201ENST00000422823 811 ntBASIC26.71■■□□□ 1.87
COL23A1Q86Y22 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 SOX15-203ENST00000570788 1093 ntBASIC26.71■■□□□ 1.87
COL23A1Q86Y22 AC233702.5-201ENST00000584107 538 ntBASIC26.71■■□□□ 1.87
COL23A1Q86Y22 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 ANOS2P-203ENST00000472227 1816 ntBASIC26.71■■□□□ 1.87
COL23A1Q86Y22 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL23A1Q86Y22 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
COL23A1Q86Y22 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
COL23A1Q86Y22 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.7■■□□□ 1.87
COL23A1Q86Y22 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
COL23A1Q86Y22 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
COL23A1Q86Y22 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.7■■□□□ 1.87
COL23A1Q86Y22 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.7■■□□□ 1.87
COL23A1Q86Y22 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.7■■□□□ 1.86
COL23A1Q86Y22 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
COL23A1Q86Y22 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL23A1Q86Y22 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 RPS2P55-201ENST00000397318 883 ntBASIC26.68■■□□□ 1.86
COL23A1Q86Y22 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 AC012618.2-201ENST00000428058 849 ntBASIC26.68■■□□□ 1.86
COL23A1Q86Y22 TSPY15P-201ENST00000457163 923 ntBASIC26.68■■□□□ 1.86
COL23A1Q86Y22 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 AC107956.1-201ENST00000494359 873 ntBASIC26.68■■□□□ 1.86
COL23A1Q86Y22 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 AL589743.5-201ENST00000616611 1050 ntBASIC26.68■■□□□ 1.86
COL23A1Q86Y22 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.68■■□□□ 1.86
COL23A1Q86Y22 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL23A1Q86Y22 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
COL23A1Q86Y22 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL23A1Q86Y22 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.67■■□□□ 1.86
COL23A1Q86Y22 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
COL23A1Q86Y22 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.67■■□□□ 1.86
COL23A1Q86Y22 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.67■■□□□ 1.86
COL23A1Q86Y22 AC133561.5-201ENST00000635547 218 ntBASIC26.67■■□□□ 1.86
COL23A1Q86Y22 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL23A1Q86Y22 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL23A1Q86Y22 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL23A1Q86Y22 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
COL23A1Q86Y22 AC092068.2-201ENST00000590491 1708 ntBASIC26.65■■□□□ 1.86
COL23A1Q86Y22 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
COL23A1Q86Y22 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms