Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRRC28Q86X40 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC28Q86X40 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 AC091305.1-201ENST00000479476 895 ntBASIC18.62■□□□□ 0.57
LRRC28Q86X40 AC104564.3-201ENST00000582367 638 ntBASIC18.62■□□□□ 0.57
LRRC28Q86X40 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRRC28Q86X40 AC133637.1-201ENST00000624115 1537 ntBASIC18.62■□□□□ 0.57
LRRC28Q86X40 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.62■□□□□ 0.57
LRRC28Q86X40 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC28Q86X40 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC28Q86X40 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC28Q86X40 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC28Q86X40 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC28Q86X40 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LRRC28Q86X40 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 RASA4CP-201ENST00000424092 1398 ntBASIC18.61■□□□□ 0.57
LRRC28Q86X40 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC28Q86X40 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC28Q86X40 BX842568.3-201ENST00000418104 571 ntBASIC18.61■□□□□ 0.57
LRRC28Q86X40 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC28Q86X40 AC008764.7-201ENST00000593779 1081 ntBASIC18.61■□□□□ 0.57
LRRC28Q86X40 AC233992.3-201ENST00000607491 485 ntBASIC18.61■□□□□ 0.57
LRRC28Q86X40 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC28Q86X40 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC28Q86X40 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 AC027682.1-201ENST00000562846 899 ntBASIC18.6■□□□□ 0.57
LRRC28Q86X40 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC28Q86X40 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC28Q86X40 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC28Q86X40 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC28Q86X40 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC28Q86X40 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC28Q86X40 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC28Q86X40 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC28Q86X40 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC28Q86X40 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC28Q86X40 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC28Q86X40 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC28Q86X40 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC28Q86X40 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRRC28Q86X40 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms