Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF39Q86UA1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 Z98882.1-201ENST00000622160 2253 ntBASIC21.73■■□□□ 1.07
PRPF39Q86UA1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 AL034346.1-201ENST00000568244 1277 ntBASIC21.73■■□□□ 1.07
PRPF39Q86UA1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF39Q86UA1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 AF106564.1-201ENST00000607058 2553 ntBASIC21.72■■□□□ 1.07
PRPF39Q86UA1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF39Q86UA1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF39Q86UA1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 SLC25A24-204ENST00000569674 2357 ntBASIC21.7■■□□□ 1.06
PRPF39Q86UA1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PRPF39Q86UA1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 AC016769.1-201ENST00000409132 1010 ntBASIC21.69■■□□□ 1.06
PRPF39Q86UA1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF39Q86UA1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF39Q86UA1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms