Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD3Q7Z407 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.77□□□□□ -0.04
CSMD3Q7Z407 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD3Q7Z407 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD3Q7Z407 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD3Q7Z407 SOX15-203ENST00000570788 1093 ntBASIC14.77□□□□□ -0.04
CSMD3Q7Z407 AC137767.1-201ENST00000602918 1920 ntBASIC14.77□□□□□ -0.04
CSMD3Q7Z407 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSMD3Q7Z407 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 CYP2T3P-201ENST00000601990 817 ntBASIC14.77□□□□□ -0.05
CSMD3Q7Z407 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSMD3Q7Z407 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AC069544.1-201ENST00000609399 999 ntBASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AC012618.2-201ENST00000428058 849 ntBASIC14.76□□□□□ -0.05
CSMD3Q7Z407 TSPY15P-201ENST00000457163 923 ntBASIC14.76□□□□□ -0.05
CSMD3Q7Z407 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSMD3Q7Z407 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 RN7SL850P-201ENST00000579959 291 ntBASIC14.75□□□□□ -0.05
CSMD3Q7Z407 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.75□□□□□ -0.05
CSMD3Q7Z407 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 OR7E47P-201ENST00000546390 1422 ntBASIC14.74□□□□□ -0.05
CSMD3Q7Z407 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 C2orf69P4-201ENST00000565394 541 ntBASIC14.74□□□□□ -0.05
CSMD3Q7Z407 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 AC060766.5-201ENST00000590539 871 ntBASIC14.74□□□□□ -0.05
CSMD3Q7Z407 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 HLA-B-256ENST00000639848 1089 ntBASIC14.74□□□□□ -0.05
CSMD3Q7Z407 AC061975.6-201ENST00000579045 1553 ntBASIC14.74□□□□□ -0.05
CSMD3Q7Z407 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 AL034346.1-201ENST00000568244 1277 ntBASIC14.74□□□□□ -0.05
CSMD3Q7Z407 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.74□□□□□ -0.05
CSMD3Q7Z407 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 AL591742.1-201ENST00000604433 565 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms