Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AL512625.2-201ENST00000417533 625 ntBASIC26.7■■□□□ 1.86
COPS6Q7L5N1 AC073210.2-201ENST00000430369 194 ntBASIC26.7■■□□□ 1.86
COPS6Q7L5N1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 KRT18P6-201ENST00000555540 1265 ntBASIC26.7■■□□□ 1.86
COPS6Q7L5N1 AC069236.1-201ENST00000604339 616 ntBASIC26.7■■□□□ 1.86
COPS6Q7L5N1 AC008694.1-202ENST00000636953 945 ntBASIC26.7■■□□□ 1.86
COPS6Q7L5N1 AC133041.1-202ENST00000642053 222 ntBASIC26.7■■□□□ 1.86
COPS6Q7L5N1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
COPS6Q7L5N1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 AC233723.2-201ENST00000623798 2106 ntBASIC26.69■■□□□ 1.86
COPS6Q7L5N1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.69■■□□□ 1.86
COPS6Q7L5N1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
COPS6Q7L5N1 GUSBP5-202ENST00000510805 1989 ntBASIC26.67■■□□□ 1.86
COPS6Q7L5N1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
COPS6Q7L5N1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.67■■□□□ 1.86
COPS6Q7L5N1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.67■■□□□ 1.86
COPS6Q7L5N1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.67■■□□□ 1.86
COPS6Q7L5N1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
COPS6Q7L5N1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COPS6Q7L5N1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 AL162412.1-201ENST00000567129 965 ntBASIC26.66■■□□□ 1.86
COPS6Q7L5N1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
COPS6Q7L5N1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 MIR4758-201ENST00000577688 71 ntBASIC26.65■■□□□ 1.86
COPS6Q7L5N1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COPS6Q7L5N1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 RARRES2P4-201ENST00000514074 484 ntBASIC26.64■■□□□ 1.86
COPS6Q7L5N1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COPS6Q7L5N1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
COPS6Q7L5N1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
COPS6Q7L5N1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 AC091799.1-201ENST00000422823 811 ntBASIC26.63■■□□□ 1.85
COPS6Q7L5N1 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.63■■□□□ 1.85
COPS6Q7L5N1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COPS6Q7L5N1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COPS6Q7L5N1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms