Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.1■□□□□ 0.97
USP45Q70EL2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP45Q70EL2 MYCNOS-205ENST00000641950 531 ntBASIC21.1■□□□□ 0.97
USP45Q70EL2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
USP45Q70EL2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP45Q70EL2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
USP45Q70EL2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP45Q70EL2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP45Q70EL2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP45Q70EL2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP45Q70EL2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP45Q70EL2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP45Q70EL2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.09■□□□□ 0.97
USP45Q70EL2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.09■□□□□ 0.97
USP45Q70EL2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.09■□□□□ 0.97
USP45Q70EL2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.09■□□□□ 0.97
USP45Q70EL2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.09■□□□□ 0.97
USP45Q70EL2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.09■□□□□ 0.97
USP45Q70EL2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.09■□□□□ 0.97
USP45Q70EL2 KRT16P2-201ENST00000414673 1423 ntBASIC21.09■□□□□ 0.97
USP45Q70EL2 PKD1P6-201ENST00000343738 4769 ntBASIC21.09■□□□□ 0.97
USP45Q70EL2 AC061975.6-201ENST00000579045 1553 ntBASIC21.09■□□□□ 0.97
USP45Q70EL2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.09■□□□□ 0.97
USP45Q70EL2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP45Q70EL2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP45Q70EL2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP45Q70EL2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP45Q70EL2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP45Q70EL2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.08■□□□□ 0.97
USP45Q70EL2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.08■□□□□ 0.97
USP45Q70EL2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.08■□□□□ 0.97
USP45Q70EL2 SLC7A5P2-201ENST00000553010 536 ntBASIC21.08■□□□□ 0.97
USP45Q70EL2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP45Q70EL2 BID-214ENST00000617586 542 ntTSL 5 BASIC21.08■□□□□ 0.97
USP45Q70EL2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP45Q70EL2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.08■□□□□ 0.96
USP45Q70EL2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
USP45Q70EL2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
USP45Q70EL2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP45Q70EL2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP45Q70EL2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP45Q70EL2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 AC004911.1-201ENST00000416316 871 ntBASIC21.07■□□□□ 0.96
USP45Q70EL2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.07■□□□□ 0.96
USP45Q70EL2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.07■□□□□ 0.96
USP45Q70EL2 SLC7A5P1-201ENST00000568957 537 ntBASIC21.07■□□□□ 0.96
USP45Q70EL2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP45Q70EL2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP45Q70EL2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP45Q70EL2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.06■□□□□ 0.96
USP45Q70EL2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.06■□□□□ 0.96
USP45Q70EL2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
USP45Q70EL2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.06■□□□□ 0.96
USP45Q70EL2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.06■□□□□ 0.96
USP45Q70EL2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP45Q70EL2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.06■□□□□ 0.96
USP45Q70EL2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.06■□□□□ 0.96
USP45Q70EL2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP45Q70EL2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.06■□□□□ 0.96
USP45Q70EL2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
USP45Q70EL2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.06■□□□□ 0.96
USP45Q70EL2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
USP45Q70EL2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.05■□□□□ 0.96
USP45Q70EL2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP45Q70EL2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.05■□□□□ 0.96
USP45Q70EL2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP45Q70EL2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms