Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.03■■□□□ 1.6
CTR9Q6PD62 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.03■■□□□ 1.6
CTR9Q6PD62 AC231657.2-201ENST00000624556 255 ntBASIC25.03■■□□□ 1.6
CTR9Q6PD62 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CTR9Q6PD62 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CTR9Q6PD62 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CTR9Q6PD62 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CTR9Q6PD62 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CTR9Q6PD62 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CTR9Q6PD62 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CTR9Q6PD62 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CTR9Q6PD62 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CTR9Q6PD62 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.02■■□□□ 1.6
CTR9Q6PD62 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CTR9Q6PD62 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CTR9Q6PD62 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CTR9Q6PD62 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CTR9Q6PD62 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.02■■□□□ 1.6
CTR9Q6PD62 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.02■■□□□ 1.6
CTR9Q6PD62 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CTR9Q6PD62 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CTR9Q6PD62 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CTR9Q6PD62 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CTR9Q6PD62 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 ID1-201ENST00000376105 1233 ntBASIC25.01■■□□□ 1.59
CTR9Q6PD62 AC007322.1-201ENST00000426983 750 ntBASIC25.01■■□□□ 1.59
CTR9Q6PD62 TERF1P5-201ENST00000477545 1207 ntBASIC25.01■■□□□ 1.59
CTR9Q6PD62 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 AL050303.2-201ENST00000619798 666 ntBASIC25.01■■□□□ 1.59
CTR9Q6PD62 AC120498.10-201ENST00000621827 505 ntBASIC25.01■■□□□ 1.59
CTR9Q6PD62 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.01■■□□□ 1.59
CTR9Q6PD62 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 KRT16P2-201ENST00000414673 1423 ntBASIC25.01■■□□□ 1.59
CTR9Q6PD62 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CTR9Q6PD62 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CTR9Q6PD62 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CTR9Q6PD62 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25■■□□□ 1.59
CTR9Q6PD62 MIR663A-201ENST00000385250 93 ntBASIC25■■□□□ 1.59
CTR9Q6PD62 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
CTR9Q6PD62 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25■■□□□ 1.59
CTR9Q6PD62 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
CTR9Q6PD62 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
CTR9Q6PD62 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25■■□□□ 1.59
CTR9Q6PD62 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25■■□□□ 1.59
CTR9Q6PD62 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CTR9Q6PD62 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CTR9Q6PD62 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CTR9Q6PD62 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CTR9Q6PD62 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.99■■□□□ 1.59
CTR9Q6PD62 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CTR9Q6PD62 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.98■■□□□ 1.59
CTR9Q6PD62 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CTR9Q6PD62 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CTR9Q6PD62 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
CTR9Q6PD62 AC006970.2-201ENST00000450065 779 ntBASIC24.98■■□□□ 1.59
CTR9Q6PD62 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CTR9Q6PD62 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.98■■□□□ 1.59
CTR9Q6PD62 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CTR9Q6PD62 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTR9Q6PD62 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.97■■□□□ 1.59
CTR9Q6PD62 HLA-L-209ENST00000420110 1011 ntBASIC24.97■■□□□ 1.59
CTR9Q6PD62 NCF1B-203ENST00000435988 1254 ntBASIC24.97■■□□□ 1.59
CTR9Q6PD62 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.97■■□□□ 1.59
CTR9Q6PD62 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.97■■□□□ 1.59
CTR9Q6PD62 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.97■■□□□ 1.59
CTR9Q6PD62 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.97■■□□□ 1.59
CTR9Q6PD62 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CTR9Q6PD62 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.97■■□□□ 1.59
CTR9Q6PD62 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CTR9Q6PD62 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CTR9Q6PD62 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CTR9Q6PD62 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
CTR9Q6PD62 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CTR9Q6PD62 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.96■■□□□ 1.59
CTR9Q6PD62 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.96■■□□□ 1.59
CTR9Q6PD62 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
CTR9Q6PD62 AC005181.1-201ENST00000604782 1256 ntBASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms