Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3CQ6NXT2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 AC243732.1-201ENST00000612648 864 ntBASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 AC026471.6-201ENST00000622954 1905 ntBASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 AC061975.6-201ENST00000579045 1553 ntBASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3CQ6NXT2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 AF201337.1-201ENST00000520239 748 ntBASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
H3F3CQ6NXT2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 RBM17P2-201ENST00000616397 1405 ntBASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 AL355802.2-201ENST00000402069 882 ntBASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 FAM99A-202ENST00000538190 1989 ntBASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
H3F3CQ6NXT2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 AL162412.1-201ENST00000567129 965 ntBASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 AC242852.2-201ENST00000615738 1807 ntBASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3CQ6NXT2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 OR10C1-204ENST00000622521 1039 ntBASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 AL024507.2-201ENST00000606070 2574 ntBASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H3F3CQ6NXT2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
H3F3CQ6NXT2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
H3F3CQ6NXT2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.39■□□□□ 0.7
H3F3CQ6NXT2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.39■□□□□ 0.7
H3F3CQ6NXT2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.39■□□□□ 0.69
H3F3CQ6NXT2 AC010542.4-201ENST00000563151 1910 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms