Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC32.2■■■□□ 2.74
CDC42BPAQ5VT25 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.2■■■□□ 2.74
CDC42BPAQ5VT25 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CDC42BPAQ5VT25 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 AC073648.6-201ENST00000641589 218 ntBASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
CDC42BPAQ5VT25 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 AC026471.6-201ENST00000622954 1905 ntBASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CDC42BPAQ5VT25 AL596275.1-201ENST00000423464 877 ntBASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.17■■■□□ 2.74
CDC42BPAQ5VT25 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 C11orf96-202ENST00000528572 1834 ntBASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
CDC42BPAQ5VT25 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPAQ5VT25 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
CDC42BPAQ5VT25 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 AC100791.3-201ENST00000617619 330 ntBASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 AL359736.2-201ENST00000621992 437 ntBASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC32.13■■■□□ 2.73
CDC42BPAQ5VT25 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDC42BPAQ5VT25 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CDC42BPAQ5VT25 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.12■■■□□ 2.73
CDC42BPAQ5VT25 PNMA6B-201ENST00000538162 1200 ntBASIC32.12■■■□□ 2.73
CDC42BPAQ5VT25 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CDC42BPAQ5VT25 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDC42BPAQ5VT25 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDC42BPAQ5VT25 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPAQ5VT25 PKM-204ENST00000449901 2526 ntTSL 2 BASIC32.11■■■□□ 2.73
CDC42BPAQ5VT25 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC32.11■■■□□ 2.73
CDC42BPAQ5VT25 AC127496.7-201ENST00000625110 1798 ntBASIC32.11■■■□□ 2.73
CDC42BPAQ5VT25 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPAQ5VT25 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.11■■■□□ 2.73
CDC42BPAQ5VT25 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC32.11■■■□□ 2.73
CDC42BPAQ5VT25 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPAQ5VT25 LSM12P1-201ENST00000411836 588 ntBASIC32.1■■■□□ 2.73
CDC42BPAQ5VT25 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC32.1■■■□□ 2.73
CDC42BPAQ5VT25 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPAQ5VT25 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPAQ5VT25 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPAQ5VT25 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPAQ5VT25 ARL16-209ENST00000573715 763 ntTSL 3 BASIC32.09■■■□□ 2.73
CDC42BPAQ5VT25 ARL16-211ENST00000576135 694 ntTSL 3 BASIC32.09■■■□□ 2.73
CDC42BPAQ5VT25 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC32.09■■■□□ 2.73
CDC42BPAQ5VT25 AC245052.3-201ENST00000450182 901 ntBASIC32.09■■■□□ 2.73
CDC42BPAQ5VT25 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms