Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF1Q5TC12 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF1Q5TC12 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF1Q5TC12 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF1Q5TC12 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF1Q5TC12 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.17■□□□□ 0.5
ATPAF1Q5TC12 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 RNF165-205ENST00000588679 2904 ntBASIC18.16■□□□□ 0.5
ATPAF1Q5TC12 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATPAF1Q5TC12 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATPAF1Q5TC12 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.14■□□□□ 0.5
ATPAF1Q5TC12 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATPAF1Q5TC12 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 TSPY26P-201ENST00000476365 1326 ntBASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
ATPAF1Q5TC12 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ATPAF1Q5TC12 LINC01006-201ENST00000333319 2292 ntBASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 MIR572-201ENST00000384983 95 ntBASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF1Q5TC12 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms