Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 AF201337.1-201ENST00000520239 748 ntBASIC18.55■□□□□ 0.56
FREM1Q5H8C1 AC080038.1-201ENST00000611274 1154 ntBASIC18.55■□□□□ 0.56
FREM1Q5H8C1 AC011767.1-201ENST00000617410 1153 ntBASIC18.55■□□□□ 0.56
FREM1Q5H8C1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.55■□□□□ 0.56
FREM1Q5H8C1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FREM1Q5H8C1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.54■□□□□ 0.56
FREM1Q5H8C1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 AC010536.3-201ENST00000620306 533 ntBASIC18.54■□□□□ 0.56
FREM1Q5H8C1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FREM1Q5H8C1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FREM1Q5H8C1 AC068338.2-201ENST00000563278 1430 ntBASIC18.53■□□□□ 0.56
FREM1Q5H8C1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 RBM17P2-201ENST00000616397 1405 ntBASIC18.52■□□□□ 0.56
FREM1Q5H8C1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.52■□□□□ 0.56
FREM1Q5H8C1 AC231657.2-201ENST00000624556 255 ntBASIC18.52■□□□□ 0.56
FREM1Q5H8C1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
FREM1Q5H8C1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FREM1Q5H8C1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
FREM1Q5H8C1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FREM1Q5H8C1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms