Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YBL005W-AYBL005W-A 1323 nt3.33□□□□□ -1.88
VPS38Q05919 YMR046CYMR046C 1323 nt3.33□□□□□ -1.88
VPS38Q05919 AEP1YMR064W 1557 nt3.33□□□□□ -1.88
VPS38Q05919 FAS1YKL182W 6156 nt3.32□□□□□ -1.88
VPS38Q05919 CIN1YOR349W 3045 nt3.32□□□□□ -1.88
VPS38Q05919 YGR073CYGR073C 372 nt3.32□□□□□ -1.88
VPS38Q05919 GOS1YHL031C 672 nt3.32□□□□□ -1.88
VPS38Q05919 EST3YIL009C-A 546 nt3.32□□□□□ -1.88
VPS38Q05919 DAL2YIR029W 1032 nt3.32□□□□□ -1.88
VPS38Q05919 VMA5YKL080W 1179 nt3.32□□□□□ -1.88
VPS38Q05919 RPL6BYLR448W 531 nt3.32□□□□□ -1.88
VPS38Q05919 RUF5-1RUF5-1 710 nt3.32□□□□□ -1.88
VPS38Q05919 RUF5-2RUF5-2 710 nt3.32□□□□□ -1.88
VPS38Q05919 YOL114CYOL114C 609 nt3.32□□□□□ -1.88
VPS38Q05919 MDM36YPR083W 1740 nt3.32□□□□□ -1.88
VPS38Q05919 GCD6YDR211W 2139 nt3.32□□□□□ -1.88
VPS38Q05919 NTO1YPR031W 2247 nt3.31□□□□□ -1.88
VPS38Q05919 RAD18YCR066W 1464 nt3.31□□□□□ -1.88
VPS38Q05919 APM3YBR288C 1452 nt3.31□□□□□ -1.88
VPS38Q05919 DIG2YDR480W 972 nt3.31□□□□□ -1.88
VPS38Q05919 VAB2YEL005C 849 nt3.31□□□□□ -1.88
VPS38Q05919 YER039C-AYER039C-A 219 nt3.31□□□□□ -1.88
VPS38Q05919 YKL115CYKL115C 393 nt3.31□□□□□ -1.88
VPS38Q05919 RPN13YLR421C 471 nt3.31□□□□□ -1.88
VPS38Q05919 NBP1YLR457C 960 nt3.31□□□□□ -1.88
VPS38Q05919 SEC14YMR079W 915 nt3.31□□□□□ -1.88
VPS38Q05919 YNL184CYNL184C 327 nt3.31□□□□□ -1.88
VPS38Q05919 RPS7AYOR096W 573 nt3.31□□□□□ -1.88
VPS38Q05919 LTP1YPR073C 486 nt3.31□□□□□ -1.88
VPS38Q05919 ARP5YNL059C 2268 nt3.31□□□□□ -1.88
VPS38Q05919 SRP68YPL243W 1800 nt3.3□□□□□ -1.88
VPS38Q05919 YNL284C-AYNL284C-A 1323 nt3.3□□□□□ -1.88
VPS38Q05919 STD1YOR047C 1335 nt3.3□□□□□ -1.88
VPS38Q05919 YFL015CYFL015C 495 nt3.3□□□□□ -1.88
VPS38Q05919 YGR115CYGR115C 780 nt3.3□□□□□ -1.88
VPS38Q05919 YJL032WYJL032W 315 nt3.3□□□□□ -1.88
VPS38Q05919 SDH3YKL141W 597 nt3.3□□□□□ -1.88
VPS38Q05919 TPT1YOL102C 693 nt3.3□□□□□ -1.88
VPS38Q05919 INO4YOL108C 456 nt3.3□□□□□ -1.88
VPS38Q05919 RXT2YBR095C 1293 nt3.3□□□□□ -1.88
VPS38Q05919 snR24snR24 89 nt3.3□□□□□ -1.88
VPS38Q05919 TDA1YMR291W 1761 nt3.3□□□□□ -1.88
VPS38Q05919 CDC37YDR168W 1521 nt3.29□□□□□ -1.88
VPS38Q05919 SEC15YGL233W 2733 nt3.29□□□□□ -1.88
VPS38Q05919 YNL011CYNL011C 1335 nt3.29□□□□□ -1.88
VPS38Q05919 YDL242WYDL242W 354 nt3.29□□□□□ -1.88
VPS38Q05919 YDR381C-AYDR381C-A 345 nt3.29□□□□□ -1.88
VPS38Q05919 THO1YER063W 657 nt3.29□□□□□ -1.88
VPS38Q05919 SMX2YFL017W-A 234 nt3.29□□□□□ -1.88
VPS38Q05919 LIF1YGL090W 1266 nt3.29□□□□□ -1.88
VPS38Q05919 Q0144Q0144 330 nt3.29□□□□□ -1.88
VPS38Q05919 AGE2YIL044C 897 nt3.29□□□□□ -1.88
VPS38Q05919 YIR040CYIR040C 333 nt3.29□□□□□ -1.88
VPS38Q05919 ATG10YLL042C 504 nt3.29□□□□□ -1.88
VPS38Q05919 NOP56YLR197W 1515 nt3.29□□□□□ -1.88
VPS38Q05919 YMR018WYMR018W 1545 nt3.29□□□□□ -1.88
VPS38Q05919 UBP14YBR058C 2346 nt3.28□□□□□ -1.88
VPS38Q05919 TPO5YKL174C 1857 nt3.28□□□□□ -1.88
VPS38Q05919 RMD6YEL072W 696 nt3.28□□□□□ -1.88
VPS38Q05919 SUP56tL(CAA)A 82 nt3.28□□□□□ -1.88
VPS38Q05919 SUP53tL(CAA)C 82 nt3.28□□□□□ -1.88
VPS38Q05919 tL(CAA)DtL(CAA)D 82 nt3.28□□□□□ -1.88
VPS38Q05919 tL(CAA)G1tL(CAA)G1 82 nt3.28□□□□□ -1.88
VPS38Q05919 SUP54tL(CAA)G2 82 nt3.28□□□□□ -1.88
VPS38Q05919 tL(CAA)G3tL(CAA)G3 82 nt3.28□□□□□ -1.88
VPS38Q05919 tL(CAA)KtL(CAA)K 82 nt3.28□□□□□ -1.88
VPS38Q05919 tL(CAA)LtL(CAA)L 82 nt3.28□□□□□ -1.88
VPS38Q05919 tL(CAA)MtL(CAA)M 82 nt3.28□□□□□ -1.88
VPS38Q05919 tL(CAA)NtL(CAA)N 82 nt3.28□□□□□ -1.88
VPS38Q05919 PEF1YGR058W 1008 nt3.28□□□□□ -1.88
VPS38Q05919 YLR297WYLR297W 390 nt3.28□□□□□ -1.88
VPS38Q05919 YNL050CYNL050C 813 nt3.28□□□□□ -1.88
VPS38Q05919 YNL303WYNL303W 348 nt3.28□□□□□ -1.88
VPS38Q05919 TAZ1YPR140W 1146 nt3.28□□□□□ -1.88
VPS38Q05919 POP7YBR167C 423 nt3.28□□□□□ -1.88
VPS38Q05919 YDL180WYDL180W 1644 nt3.28□□□□□ -1.88
VPS38Q05919 SYO1YDL063C 1863 nt3.28□□□□□ -1.88
VPS38Q05919 PMR1YGL167C 2853 nt3.28□□□□□ -1.88
VPS38Q05919 FAR1YJL157C 2493 nt3.28□□□□□ -1.88
VPS38Q05919 GWT1YJL091C 1473 nt3.28□□□□□ -1.88
VPS38Q05919 SPO14YKR031C 5052 nt3.27□□□□□ -1.89
VPS38Q05919 DTD1YDL219W 453 nt3.27□□□□□ -1.89
VPS38Q05919 UBC13YDR092W 462 nt3.27□□□□□ -1.89
VPS38Q05919 AIM11YER093C-A 414 nt3.27□□□□□ -1.89
VPS38Q05919 YGL109WYGL109W 324 nt3.27□□□□□ -1.89
VPS38Q05919 YHL044WYHL044W 708 nt3.27□□□□□ -1.89
VPS38Q05919 QCR10YHR001W-A 234 nt3.27□□□□□ -1.89
VPS38Q05919 PIR1YKL164C 1026 nt3.27□□□□□ -1.89
VPS38Q05919 RPL13BYMR142C 600 nt3.27□□□□□ -1.89
VPS38Q05919 HHF2YNL030W 312 nt3.27□□□□□ -1.89
VPS38Q05919 RSM19YNR037C 276 nt3.27□□□□□ -1.89
VPS38Q05919 RRG7YOR305W 729 nt3.27□□□□□ -1.89
VPS38Q05919 VBA4YDR119W 2307 nt3.27□□□□□ -1.89
VPS38Q05919 POL4YCR014C 1749 nt3.27□□□□□ -1.89
VPS38Q05919 CHS3YBR023C 3498 nt3.27□□□□□ -1.89
VPS38Q05919 FUN30YAL019W 3396 nt3.26□□□□□ -1.89
VPS38Q05919 RED1YLR263W 2484 nt3.26□□□□□ -1.89
VPS38Q05919 ATG13YPR185W 2217 nt3.26□□□□□ -1.89
VPS38Q05919 ARO1YDR127W 4767 nt3.26□□□□□ -1.89
VPS38Q05919 RIM1YCR028C-A 408 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 469.6 ms