Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR3Q02985 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR3Q02985 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.45■□□□□ 0.22
CFHR3Q02985 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.45■□□□□ 0.22
CFHR3Q02985 AC120498.10-201ENST00000621827 505 ntBASIC16.45■□□□□ 0.22
CFHR3Q02985 AC073111.5-205ENST00000641717 521 ntBASIC16.45■□□□□ 0.22
CFHR3Q02985 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
CFHR3Q02985 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR3Q02985 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR3Q02985 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR3Q02985 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CFHR3Q02985 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CFHR3Q02985 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
CFHR3Q02985 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.45■□□□□ 0.22
CFHR3Q02985 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CFHR3Q02985 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
CFHR3Q02985 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
CFHR3Q02985 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.44■□□□□ 0.22
CFHR3Q02985 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CFHR3Q02985 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.44■□□□□ 0.22
CFHR3Q02985 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.44■□□□□ 0.22
CFHR3Q02985 CDCA4P2-201ENST00000441182 718 ntBASIC16.44■□□□□ 0.22
CFHR3Q02985 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.44■□□□□ 0.22
CFHR3Q02985 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.44■□□□□ 0.22
CFHR3Q02985 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.44■□□□□ 0.22
CFHR3Q02985 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.44■□□□□ 0.22
CFHR3Q02985 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.44■□□□□ 0.22
CFHR3Q02985 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CFHR3Q02985 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CFHR3Q02985 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CFHR3Q02985 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CFHR3Q02985 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CFHR3Q02985 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.43■□□□□ 0.22
CFHR3Q02985 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CFHR3Q02985 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.43■□□□□ 0.22
CFHR3Q02985 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.43■□□□□ 0.22
CFHR3Q02985 DUX4L16-201ENST00000555130 1264 ntBASIC16.43■□□□□ 0.22
CFHR3Q02985 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CFHR3Q02985 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CFHR3Q02985 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.43■□□□□ 0.22
CFHR3Q02985 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CFHR3Q02985 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CFHR3Q02985 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CFHR3Q02985 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CFHR3Q02985 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CFHR3Q02985 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.42■□□□□ 0.22
CFHR3Q02985 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.42■□□□□ 0.22
CFHR3Q02985 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.42■□□□□ 0.22
CFHR3Q02985 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.42■□□□□ 0.22
CFHR3Q02985 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.42■□□□□ 0.22
CFHR3Q02985 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CFHR3Q02985 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CFHR3Q02985 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.42■□□□□ 0.22
CFHR3Q02985 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.42■□□□□ 0.22
CFHR3Q02985 AC090192.1-201ENST00000517740 490 ntBASIC16.42■□□□□ 0.22
CFHR3Q02985 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CFHR3Q02985 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
CFHR3Q02985 AC010536.3-201ENST00000620306 533 ntBASIC16.42■□□□□ 0.22
CFHR3Q02985 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CFHR3Q02985 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CFHR3Q02985 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CFHR3Q02985 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CFHR3Q02985 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms