Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 MIR663A-201ENST00000385250 93 ntBASIC21.75■■□□□ 1.07
IRX4P78413 GPX1P1-201ENST00000388829 606 ntBASIC21.75■■□□□ 1.07
IRX4P78413 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 CD99P1-205ENST00000527459 561 ntBASIC21.75■■□□□ 1.07
IRX4P78413 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.75■■□□□ 1.07
IRX4P78413 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.75■■□□□ 1.07
IRX4P78413 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.75■■□□□ 1.07
IRX4P78413 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.75■■□□□ 1.07
IRX4P78413 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
IRX4P78413 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
IRX4P78413 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
IRX4P78413 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.74■■□□□ 1.07
IRX4P78413 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.74■■□□□ 1.07
IRX4P78413 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.74■■□□□ 1.07
IRX4P78413 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.74■■□□□ 1.07
IRX4P78413 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.74■■□□□ 1.07
IRX4P78413 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
IRX4P78413 AC066615.1-201ENST00000640911 628 ntBASIC21.74■■□□□ 1.07
IRX4P78413 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
IRX4P78413 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.74■■□□□ 1.07
IRX4P78413 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
IRX4P78413 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 FAM99A-202ENST00000538190 1989 ntBASIC21.74■■□□□ 1.07
IRX4P78413 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX4P78413 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.74■■□□□ 1.07
IRX4P78413 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 AC026310.3-201ENST00000625186 2373 ntBASIC21.73■■□□□ 1.07
IRX4P78413 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.73■■□□□ 1.07
IRX4P78413 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.73■■□□□ 1.07
IRX4P78413 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.73■■□□□ 1.07
IRX4P78413 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.73■■□□□ 1.07
IRX4P78413 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
IRX4P78413 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
IRX4P78413 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX4P78413 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.73■■□□□ 1.07
IRX4P78413 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
IRX4P78413 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX4P78413 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.72■■□□□ 1.07
IRX4P78413 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IRX4P78413 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX4P78413 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.72■■□□□ 1.07
IRX4P78413 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.72■■□□□ 1.07
IRX4P78413 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
IRX4P78413 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.72■■□□□ 1.07
IRX4P78413 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX4P78413 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX4P78413 AC010542.4-201ENST00000563151 1910 ntBASIC21.72■■□□□ 1.07
IRX4P78413 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX4P78413 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX4P78413 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
IRX4P78413 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
IRX4P78413 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
IRX4P78413 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.71■■□□□ 1.07
IRX4P78413 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
IRX4P78413 KRT18P11-201ENST00000435214 1283 ntBASIC21.71■■□□□ 1.07
IRX4P78413 TSPY20P-201ENST00000450910 630 ntBASIC21.71■■□□□ 1.07
IRX4P78413 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
IRX4P78413 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.71■■□□□ 1.07
IRX4P78413 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.71■■□□□ 1.07
IRX4P78413 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
IRX4P78413 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
IRX4P78413 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
IRX4P78413 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX4P78413 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
IRX4P78413 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
IRX4P78413 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.7■■□□□ 1.07
IRX4P78413 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IRX4P78413 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
IRX4P78413 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms