Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.19■□□□□ 0.66
CDC42P60953 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.19■□□□□ 0.66
CDC42P60953 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
CDC42P60953 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDC42P60953 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDC42P60953 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42P60953 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDC42P60953 AC003102.1-202ENST00000563394 1796 ntBASIC19.19■□□□□ 0.66
CDC42P60953 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC42P60953 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 AC010141.3-201ENST00000456659 717 ntBASIC19.18■□□□□ 0.66
CDC42P60953 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.18■□□□□ 0.66
CDC42P60953 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC42P60953 MIR4787-201ENST00000607364 84 ntBASIC19.18■□□□□ 0.66
CDC42P60953 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.18■□□□□ 0.66
CDC42P60953 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC42P60953 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42P60953 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42P60953 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDC42P60953 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC42P60953 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CDC42P60953 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDC42P60953 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42P60953 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42P60953 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42P60953 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42P60953 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.16■□□□□ 0.66
CDC42P60953 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDC42P60953 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42P60953 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42P60953 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42P60953 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 AC073314.1-201ENST00000568729 2216 ntBASIC19.15■□□□□ 0.66
CDC42P60953 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42P60953 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.15■□□□□ 0.66
CDC42P60953 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDC42P60953 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.15■□□□□ 0.66
CDC42P60953 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDC42P60953 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.15■□□□□ 0.66
CDC42P60953 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.15■□□□□ 0.66
CDC42P60953 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42P60953 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CDC42P60953 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDC42P60953 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDC42P60953 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDC42P60953 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDC42P60953 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42P60953 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42P60953 OR2I1P-207ENST00000453522 948 ntBASIC19.14■□□□□ 0.65
CDC42P60953 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.14■□□□□ 0.65
CDC42P60953 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDC42P60953 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDC42P60953 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.14■□□□□ 0.65
CDC42P60953 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42P60953 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CDC42P60953 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42P60953 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDC42P60953 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42P60953 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42P60953 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms