Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN20P56880 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN20P56880 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN20P56880 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN20P56880 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN20P56880 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN20P56880 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN20P56880 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN20P56880 AC004854.2-201ENST00000608450 1441 ntBASIC19.24■□□□□ 0.67
CLDN20P56880 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN20P56880 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN20P56880 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN20P56880 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN20P56880 AP004607.4-201ENST00000530158 1459 ntBASIC19.23■□□□□ 0.67
CLDN20P56880 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN20P56880 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.23■□□□□ 0.67
CLDN20P56880 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.23■□□□□ 0.67
CLDN20P56880 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN20P56880 AC092666.2-201ENST00000613287 246 ntBASIC19.23■□□□□ 0.67
CLDN20P56880 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN20P56880 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN20P56880 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN20P56880 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CLDN20P56880 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN20P56880 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 RNF165-205ENST00000588679 2904 ntBASIC19.22■□□□□ 0.67
CLDN20P56880 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN20P56880 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN20P56880 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLDN20P56880 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN20P56880 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN20P56880 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.21■□□□□ 0.67
CLDN20P56880 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN20P56880 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN20P56880 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN20P56880 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLDN20P56880 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN20P56880 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN20P56880 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN20P56880 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN20P56880 AC022517.1-201ENST00000592429 346 ntBASIC19.2■□□□□ 0.66
CLDN20P56880 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN20P56880 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN20P56880 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN20P56880 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN20P56880 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN20P56880 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN20P56880 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN20P56880 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CLDN20P56880 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN20P56880 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN20P56880 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN20P56880 KRT87P-202ENST00000534226 1464 ntBASIC19.19■□□□□ 0.66
CLDN20P56880 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN20P56880 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLDN20P56880 AC026471.6-201ENST00000622954 1905 ntBASIC19.19■□□□□ 0.66
CLDN20P56880 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN20P56880 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN20P56880 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLDN20P56880 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms