Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH4P55283 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH4P55283 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH4P55283 AC244015.2-201ENST00000616358 1861 ntBASIC21.56■■□□□ 1.04
CDH4P55283 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH4P55283 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH4P55283 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDH4P55283 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 FBXW4P1-201ENST00000426721 2239 ntBASIC21.55■■□□□ 1.04
CDH4P55283 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CDH4P55283 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.55■■□□□ 1.04
CDH4P55283 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH4P55283 AC010536.3-201ENST00000620306 533 ntBASIC21.55■■□□□ 1.04
CDH4P55283 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 AC079834.2-201ENST00000609776 1949 ntBASIC21.55■■□□□ 1.04
CDH4P55283 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH4P55283 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH4P55283 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH4P55283 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH4P55283 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH4P55283 CDCA4P2-201ENST00000441182 718 ntBASIC21.54■■□□□ 1.04
CDH4P55283 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH4P55283 DUX4L16-201ENST00000555130 1264 ntBASIC21.54■■□□□ 1.04
CDH4P55283 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.54■■□□□ 1.04
CDH4P55283 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
CDH4P55283 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDH4P55283 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH4P55283 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH4P55283 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH4P55283 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH4P55283 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDH4P55283 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH4P55283 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH4P55283 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH4P55283 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH4P55283 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CDH4P55283 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH4P55283 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH4P55283 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH4P55283 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDH4P55283 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
CDH4P55283 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH4P55283 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH4P55283 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH4P55283 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CDH4P55283 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.52■■□□□ 1.04
CDH4P55283 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CDH4P55283 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH4P55283 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.52■■□□□ 1.03
CDH4P55283 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDH4P55283 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.51■■□□□ 1.03
CDH4P55283 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDH4P55283 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH4P55283 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.51■■□□□ 1.03
CDH4P55283 TERF1P5-201ENST00000477545 1207 ntBASIC21.51■■□□□ 1.03
CDH4P55283 AC090192.1-201ENST00000517740 490 ntBASIC21.51■■□□□ 1.03
CDH4P55283 RAP2CP1-201ENST00000605103 478 ntBASIC21.51■■□□□ 1.03
CDH4P55283 AC231657.2-201ENST00000624556 255 ntBASIC21.51■■□□□ 1.03
CDH4P55283 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.51■■□□□ 1.03
CDH4P55283 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH4P55283 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms