Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
PRRX1P54821 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.27■□□□□ 0.35
PRRX1P54821 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PRRX1P54821 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PRRX1P54821 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.26■□□□□ 0.35
PRRX1P54821 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 KRT87P-202ENST00000534226 1464 ntBASIC17.26■□□□□ 0.35
PRRX1P54821 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.26■□□□□ 0.35
PRRX1P54821 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.26■□□□□ 0.35
PRRX1P54821 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.26■□□□□ 0.35
PRRX1P54821 KRT18P14-201ENST00000534205 1250 ntBASIC17.26■□□□□ 0.35
PRRX1P54821 TERF1P2-201ENST00000583350 1212 ntBASIC17.26■□□□□ 0.35
PRRX1P54821 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.26■□□□□ 0.35
PRRX1P54821 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRRX1P54821 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.25■□□□□ 0.35
PRRX1P54821 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
PRRX1P54821 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.25■□□□□ 0.35
PRRX1P54821 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.25■□□□□ 0.35
PRRX1P54821 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.25■□□□□ 0.35
PRRX1P54821 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.25■□□□□ 0.35
PRRX1P54821 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 CCDC92B-201ENST00000575506 885 ntBASIC17.25■□□□□ 0.35
PRRX1P54821 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 AC053503.5-201ENST00000601508 636 ntBASIC17.25■□□□□ 0.35
PRRX1P54821 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.25■□□□□ 0.35
PRRX1P54821 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRRX1P54821 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRRX1P54821 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.24■□□□□ 0.35
PRRX1P54821 AC097381.1-201ENST00000429019 1296 ntBASIC17.24■□□□□ 0.35
PRRX1P54821 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.24■□□□□ 0.35
PRRX1P54821 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.24■□□□□ 0.35
PRRX1P54821 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PRRX1P54821 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.24■□□□□ 0.35
PRRX1P54821 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRRX1P54821 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRRX1P54821 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 AC007375.3-201ENST00000600936 2314 ntBASIC17.23■□□□□ 0.35
PRRX1P54821 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.23■□□□□ 0.35
PRRX1P54821 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PRRX1P54821 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.23■□□□□ 0.35
PRRX1P54821 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.23■□□□□ 0.35
PRRX1P54821 MIR6821-201ENST00000617625 74 ntBASIC17.23■□□□□ 0.35
PRRX1P54821 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.23■□□□□ 0.35
PRRX1P54821 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.23■□□□□ 0.35
PRRX1P54821 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRRX1P54821 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PRRX1P54821 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRRX1P54821 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.22■□□□□ 0.35
PRRX1P54821 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.22■□□□□ 0.35
PRRX1P54821 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.22■□□□□ 0.35
PRRX1P54821 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 AC034268.1-201ENST00000441047 882 ntBASIC17.22■□□□□ 0.35
PRRX1P54821 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.22■□□□□ 0.35
PRRX1P54821 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.22■□□□□ 0.35
PRRX1P54821 EEF1DP3-203ENST00000566025 782 ntBASIC17.22■□□□□ 0.35
PRRX1P54821 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.22■□□□□ 0.35
PRRX1P54821 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.22■□□□□ 0.35
PRRX1P54821 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.22■□□□□ 0.35
PRRX1P54821 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.22■□□□□ 0.35
PRRX1P54821 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRRX1P54821 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms