Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 YCR064CYCR064C 411 nt3.73□□□□□ -1.81
ATG4P53867 snR7-SsnR7-S 179 nt3.73□□□□□ -1.81
ATG4P53867 YDR246W-AYDR246W-A 201 nt3.73□□□□□ -1.81
ATG4P53867 AML1YGR001C 747 nt3.73□□□□□ -1.81
ATG4P53867 YIR020CYIR020C 303 nt3.73□□□□□ -1.81
ATG4P53867 EFB1YAL003W 621 nt3.73□□□□□ -1.81
ATG4P53867 IRC18YJL037W 675 nt3.73□□□□□ -1.81
ATG4P53867 ACF4YJR083C 930 nt3.73□□□□□ -1.81
ATG4P53867 MCR1YKL150W 909 nt3.73□□□□□ -1.81
ATG4P53867 YKT6YKL196C 603 nt3.73□□□□□ -1.81
ATG4P53867 RNP1YLL046C 750 nt3.73□□□□□ -1.81
ATG4P53867 IES3YLR052W 753 nt3.73□□□□□ -1.81
ATG4P53867 YOL159CYOL159C 516 nt3.73□□□□□ -1.81
ATG4P53867 YPL077CYPL077C 723 nt3.73□□□□□ -1.81
ATG4P53867 YPL107WYPL107W 747 nt3.73□□□□□ -1.81
ATG4P53867 YPR059CYPR059C 387 nt3.73□□□□□ -1.81
ATG4P53867 CMD1YBR109C 444 nt3.73□□□□□ -1.81
ATG4P53867 STE24YJR117W 1362 nt3.73□□□□□ -1.81
ATG4P53867 15S_rRNA15S_rRNA 1649 nt3.73□□□□□ -1.81
ATG4P53867 RPS13YDR064W 456 nt3.72□□□□□ -1.81
ATG4P53867 YGL152CYGL152C 678 nt3.72□□□□□ -1.81
ATG4P53867 YHR125WYHR125W 306 nt3.72□□□□□ -1.81
ATG4P53867 YIL175WYIL175W 318 nt3.72□□□□□ -1.81
ATG4P53867 SEC22YLR268W 645 nt3.72□□□□□ -1.81
ATG4P53867 SIL1YOL031C 1266 nt3.72□□□□□ -1.81
ATG4P53867 NGL1YOL042W 1092 nt3.72□□□□□ -1.81
ATG4P53867 YOL150CYOL150C 312 nt3.72□□□□□ -1.81
ATG4P53867 GRE2YOL151W 1029 nt3.72□□□□□ -1.81
ATG4P53867 TPK2YPL203W 1143 nt3.72□□□□□ -1.81
ATG4P53867 GPX2YBR244W 489 nt3.72□□□□□ -1.81
ATG4P53867 EGT2YNL327W 3126 nt3.72□□□□□ -1.81
ATG4P53867 PES4YFR023W 1836 nt3.72□□□□□ -1.81
ATG4P53867 RRP42YDL111C 798 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)CtK(CUU)C 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)D1tK(CUU)D1 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)D2tK(CUU)D2 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)E1tK(CUU)E1 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)E2tK(CUU)E2 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)FtK(CUU)F 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)G1tK(CUU)G1 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)G2tK(CUU)G2 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)G3tK(CUU)G3 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)ItK(CUU)I 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)JtK(CUU)J 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)KtK(CUU)K 73 nt3.71□□□□□ -1.82
ATG4P53867 SPI1YER150W 447 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)MtK(CUU)M 73 nt3.71□□□□□ -1.82
ATG4P53867 tK(CUU)PtK(CUU)P 73 nt3.71□□□□□ -1.82
ATG4P53867 CTK3YML112W 891 nt3.71□□□□□ -1.82
ATG4P53867 SVS1YPL163C 783 nt3.71□□□□□ -1.82
ATG4P53867 UBP12YJL197W 3765 nt3.71□□□□□ -1.82
ATG4P53867 ADY4YLR227C 1482 nt3.71□□□□□ -1.82
ATG4P53867 SPC105YGL093W 2754 nt3.71□□□□□ -1.82
ATG4P53867 MUD2YKL074C 1584 nt3.71□□□□□ -1.82
ATG4P53867 FAR8YMR029C 1572 nt3.71□□□□□ -1.82
ATG4P53867 RNT1YMR239C 1416 nt3.7□□□□□ -1.82
ATG4P53867 OLE1YGL055W 1533 nt3.7□□□□□ -1.82
ATG4P53867 PER1YCR044C 1074 nt3.7□□□□□ -1.82
ATG4P53867 YER046W-AYER046W-A 330 nt3.7□□□□□ -1.82
ATG4P53867 MTM1YGR257C 1101 nt3.7□□□□□ -1.82
ATG4P53867 YPR050CYPR050C 414 nt3.7□□□□□ -1.82
ATG4P53867 MSS18YPR134W 807 nt3.7□□□□□ -1.82
ATG4P53867 RAD52YML032C 1416 nt3.7□□□□□ -1.82
ATG4P53867 VAC7YNL054W 3498 nt3.69□□□□□ -1.82
ATG4P53867 YGL039WYGL039W 1047 nt3.69□□□□□ -1.82
ATG4P53867 MRM2YGL136C 963 nt3.69□□□□□ -1.82
ATG4P53867 YIL171WYIL171W 330 nt3.69□□□□□ -1.82
ATG4P53867 YJL127C-BYJL127C-B 159 nt3.69□□□□□ -1.82
ATG4P53867 YKL044WYKL044W 321 nt3.69□□□□□ -1.82
ATG4P53867 AIM29YKR074W 468 nt3.69□□□□□ -1.82
ATG4P53867 IDP2YLR174W 1239 nt3.69□□□□□ -1.82
ATG4P53867 YKE2YLR200W 345 nt3.69□□□□□ -1.82
ATG4P53867 VPS63YLR261C 327 nt3.69□□□□□ -1.82
ATG4P53867 YLR428CYLR428C 345 nt3.69□□□□□ -1.82
ATG4P53867 YML099W-AYML099W-A 330 nt3.69□□□□□ -1.82
ATG4P53867 DDR48YMR173W 1293 nt3.69□□□□□ -1.82
ATG4P53867 TIF11YMR260C 462 nt3.69□□□□□ -1.82
ATG4P53867 GSC2YGR032W 5688 nt3.69□□□□□ -1.82
ATG4P53867 MNR2YKL064W 2910 nt3.69□□□□□ -1.82
ATG4P53867 YBR238CYBR238C 2196 nt3.69□□□□□ -1.82
ATG4P53867 HUL5YGL141W 2733 nt3.69□□□□□ -1.82
ATG4P53867 EXO70YJL085W 1872 nt3.69□□□□□ -1.82
ATG4P53867 YKR078WYKR078W 1758 nt3.68□□□□□ -1.82
ATG4P53867 SPT23YKL020C 3249 nt3.68□□□□□ -1.82
ATG4P53867 RPN3YER021W 1572 nt3.68□□□□□ -1.82
ATG4P53867 EPO1YMR124W 2832 nt3.68□□□□□ -1.82
ATG4P53867 KIC1YHR102W 3243 nt3.68□□□□□ -1.82
ATG4P53867 YDR340WYDR340W 303 nt3.68□□□□□ -1.82
ATG4P53867 SUP56tL(CAA)A 82 nt3.68□□□□□ -1.82
ATG4P53867 SUP53tL(CAA)C 82 nt3.68□□□□□ -1.82
ATG4P53867 tL(CAA)DtL(CAA)D 82 nt3.68□□□□□ -1.82
ATG4P53867 tL(CAA)G1tL(CAA)G1 82 nt3.68□□□□□ -1.82
ATG4P53867 SUP54tL(CAA)G2 82 nt3.68□□□□□ -1.82
ATG4P53867 tL(CAA)G3tL(CAA)G3 82 nt3.68□□□□□ -1.82
ATG4P53867 tL(CAA)KtL(CAA)K 82 nt3.68□□□□□ -1.82
ATG4P53867 tL(CAA)LtL(CAA)L 82 nt3.68□□□□□ -1.82
ATG4P53867 tL(CAA)MtL(CAA)M 82 nt3.68□□□□□ -1.82
ATG4P53867 tL(CAA)NtL(CAA)N 82 nt3.68□□□□□ -1.82
ATG4P53867 tQ(UUG)CtQ(UUG)C 72 nt3.68□□□□□ -1.82
ATG4P53867 tQ(UUG)D1tQ(UUG)D1 72 nt3.68□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms